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Archive for the ‘NIEeS’ Category

A meeting report summarizing the proceedings of the “eGenomics: Cataloguing our Complete Genome Collection III” workshop held September 11–13, 2006, at the National Institute for Environmental eScience (NIEeS), Cambridge, United Kingdom, is now available:

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Comparative and Functional Genomics
Volume 2007 (2007), Article ID 47304, 7 pages
doi:10.1155/2007/47304

Meeting Report

eGenomics: Cataloguing Our Complete Genome Collection III

Dawn Field, George Garrity, Tanya Gray, Jeremy Selengut, Peter Sterk, Nick Thomson, Tatiana Tatusova, Guy Cochrane, Frank Oliver Glöckner, Renzo Kottmann, Allyson L. Lister, Yoshio Tateno, and Robert Vaughan

This 3rd workshop of the Genomic Standards Consortium was divided into two parts. The first half of the three-day workshop was dedicated to reviewing the genomic diversity of our current and future genome and metagenome collection, and exploring linkages to a series of existing projects through formal presentations. The second half was dedicated to strategic discussions. Outcomes of the workshop include a revised “Minimum Information about a Genome Sequence” (MIGS) specification (v1.1), consensus on a variety of features to be added to the Genome Catalogue (GCat), agreement by several researchers to adopt MIGS for imminent genome publications, and an agreement by the EBI and NCBI to input their genome collections into GCat for the purpose of quantifying the amount of optional data already available (e.g., for geographic location coordinates) and working towards a single, global list of all public genomes and metagenomes.

http://www.hindawi.com/GetArticle.aspx?doi=10.1155/2007/47304

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Presentation slides from the 4th GSC Workshop held on 6-8th June 2007 at NIEeS in Cambridge, are now available from the NIEeS archive

NIEeS

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The 4th Genomic Standards Consortium Workshop will be held next week, 6-8th June, 2007 at the National Institute for Environmental e-Science (NIEeS), Cambridge.

As at previous workshops there will be a mix of talks and discussion sessions, although this year the talks will be shorter and more focused on progress made towards GSC goals. There will be 6 sessions covering key topics of interest to the GSC.

There will be a special focus on progress to date, the development of MIMS, future implementation of MIGS/MIMS, CVs and ontologies for describing genomes and metagenomes, the need for a single, global list of genomes and metagenomes and the role of the GSC’s proposed Genomic Rosetta Stone.

The latest agenda is available on the GSC wiki. Workshop homepage on NIEeSweb site

Date: 6-8 June, 2007

Venue: National Institute for Environmental e-Science, Cambridge, UK

Organizers: Dawn Field, Tatiana Tatusova, Tanya Gray, George Garrity, and Frank Oliver Glöckner

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