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Archive for the ‘CEH Oxford’ Category

GSC Special Issue of OMICS – Community Consultation

Posted in CEH Oxford, Dawn Field, Eugene Kolker, GCDML, George Garrity, MIGS, MIGS/MIMS, MIMS, Susanna-Assunta Sansone, bioinformatics, data standard, data standards, genomic standards consortium, genomics, gsc, metagenome, metagenomics, omics on February 18, 2008 | Leave a Comment »

Dawn Field, Susanna-Assunta Sansone and George Garrity have been asked by the OMICS Editor and Chief Eugene Kolker to produce a special issue of OMICS based on the 5th GSC Workshop.
A community consultation has now started with the posting of the first paper on the GSC wiki. special issue of OMICS Wiki page Authors are [...]

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GSC Poster at Asia Pacific Bioinformatics Conference (APBC) 2008 : 14-17 January, Kyoto, Japan

Posted in APBC, CEH Oxford, Genome Catalogue, MIGS, MIGS/MIMS, MIMS, XForms, XSD, bioinformatics, exist, gcat, gencat, genome, genomic standards consortium, genomics, gsc, metagenome, metagenomics, orbeon, standards, xml, xml schema on January 7, 2008 | Leave a Comment »

A poster will be presented at the Asia Pacific Bioinformatics Conference 2008 describing GenCat and the Genome Catalogue, two products of the Genomic Standards Consortium (GSC). If you are attending APBC 2008 and are interested in the work of the GSC, please contact Tanya Gray at tgra at ceh.ac.uk.
About the GSC:
The Genomic Standards Consortium [...]

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A 2nd special issue of OMICS to be developed by the GSC based on the 5th GSC Workshop

Posted in 16s, CAMERA, CEH Oxford, GCDML, GenBank, INSDC, MIGS, MIGS/MIMS, MIMS, bioinformatics, ebi, gcat, gencat, genome, genomic standards consortium, genomics, gsc, metagenome, metagenomics, omics, science, standards, xml, xml schema on December 20, 2007 | 1 Comment »

Dawn Field and Susanna-Assunta Sansone guest edited a special issue of the journal OMICS on data standards as an output of the 2nd GSC workshop. There were 22 invited papers including 5 in the area of standardization of genomic data (See: Special_Issue_of_OMICS).
An overview of the issue and its goals is captured in the foreword: [...]

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GSC BoF at ISMB/ECCB 2007 & the Environmental Ontology workshop

Posted in Biology, CEH Oxford, ISMB, ISMB2007, bioinformatics, environment, envo, genome, genomic standards consortium, genomics, geo.obo, gsc, obo, ontology, standards on August 2, 2007 | Leave a Comment »

The Genomic Standards Consortium held a Birds of a Feather meeting at ISMB/ECCB 2007.
There were three presentations, and a discussion led by Robert Stevens. Presentation slides can be downloaded from the GSC wiki:
Presentation Slides
* Tatiana Tatusov slides
* Dawn Field slides
* Lynette Hirschman slides
We mostly discussed how to achieve wider community involvement. In particular we [...]

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4th GSC Workshop

Posted in Biology, CEH Oxford, MIGS, MIGS/MIMS, MIMS, NIEeS, bioinformatics, genome, genomic standards consortium, genomics, gsc, metagenome, metagenomics, ontology, standards on May 30, 2007 | Leave a Comment »

The 4th Genomic Standards Consortium Workshop will be held next week, 6-8th June, 2007 at the National Institute for Environmental e-Science (NIEeS), Cambridge.
As at previous workshops there will be a mix of talks and discussion sessions, although this year the talks will be shorter and more focused on progress made towards GSC goals. There will [...]

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