GSC 7 Webcast now available

The Metagenomics 2008 meeting was a great venue for the GSC 7 meeting. The entire meeting, including the first day dedicated to GSC activities, was presented as a Webcast. This Web Cast has now been archived and all the talks can be viewed here: http://metagenomics.calit2.net/webcast.php

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GSC Special Issue of OMICS – Community Consultation

Dawn Field, Susanna-Assunta Sansone and George Garrity have been asked by the OMICS Editor and Chief Eugene Kolker to produce a special issue of OMICS based on the 5th GSC Workshop.
A community consultation has now started with the posting of the first paper on the GSC wiki. special issue of OMICS Wiki page Authors are [...]

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GSC Poster at Asia Pacific Bioinformatics Conference (APBC) 2008 : 14-17 January, Kyoto, Japan

A poster will be presented at the Asia Pacific Bioinformatics Conference 2008 describing GenCat and the Genome Catalogue, two products of the Genomic Standards Consortium (GSC). If you are attending APBC 2008 and are interested in the work of the GSC, please contact Tanya Gray at tgra at ceh.ac.uk.
About the GSC:
The Genomic Standards Consortium [...]

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Nature Biotech paper – revised MIGS/MIMS checklist now available

At the recent Genomic Standards Consortium (GSC) workshop, George Garrity led discussions to review and produce a final version of the MIGS/MIMS checklist that will be included in the MIGS paper to be published in Nature Biotechnology in February 2008.
The revised version of the MIGS/MIMS checklist, together with comments recorded during the GSC workshop, are [...]

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A 2nd special issue of OMICS to be developed by the GSC based on the 5th GSC Workshop

Dawn Field and Susanna-Assunta Sansone guest edited a special issue of the journal OMICS on data standards as an output of the 2nd GSC workshop. There were 22 invited papers including 5 in the area of standardization of genomic data (See: Special_Issue_of_OMICS).
An overview of the issue and its goals is captured in the foreword: [...]

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Genomic Standards Consortium (GSC) 5th Workshop – slides

Further to the 5th Genomic Standards Consortium (GSC) workshop, slides are available to download from the GSC wiki:
agenda and presentations

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Standardising the Description of 16S Sequences with MIGS/MIMS

At the 5th Genomic Standards Consortium (GSC) workshop held at the EBI on 12-14th December 2007, discussions led to a proposal to standardise the description of 16S sequences using the GSC community-led standard called Minimum Information about a Genome Sequence/ Metagenome Sample (MIGS/MIMS).
MIGS/MIMS defines descriptors that can assist in the capture of a rich set [...]

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GSC BoF at ISMB/ECCB 2007 & the Environmental Ontology workshop

The Genomic Standards Consortium held a Birds of a Feather meeting at ISMB/ECCB 2007.
There were three presentations, and a discussion led by Robert Stevens. Presentation slides can be downloaded from the GSC wiki:
Presentation Slides
* Tatiana Tatusov slides
* Dawn Field slides
* Lynette Hirschman slides
We mostly discussed how to achieve wider community involvement. In particular we [...]

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GSC Birds of a Feather meeting at ISMB/ECCB 2007

The Genomic Standards Consortium will be hosting a Birds of a Feather meeting at ISMB/ECCB 2007.
Date: Monday 23rd July 2007
Time: 12.15pm – 1.30pm
Room: see noticeboards
An open invitation :-
Meet members of the Genomic Standards Consortium
Learn about the activities of the Genomic Standards Consortium
Find out how to participate in the work of the Genomic Standards Consortium
Join in [...]

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eGenomics III – meeting report published

A meeting report summarizing the proceedings of the “eGenomics: Cataloguing our Complete Genome Collection III” workshop held September 11–13, 2006, at the National Institute for Environmental eScience (NIEeS), Cambridge, United Kingdom, is now available:
download meeting report

Comparative and Functional Genomics
Volume 2007 (2007), Article ID 47304, 7 [...]

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